diff --git a/packages/cli/src/deprecation/__tests__/deprecation.service.test.ts b/packages/cli/src/deprecation/__tests__/deprecation.service.test.ts
index cf52d2f225..5f4c8f8fc2 100644
--- a/packages/cli/src/deprecation/__tests__/deprecation.service.test.ts
+++ b/packages/cli/src/deprecation/__tests__/deprecation.service.test.ts
@@ -1,13 +1,16 @@
+import { GlobalConfig } from '@n8n/config';
 import { captor, mock } from 'jest-mock-extended';
 import type { Logger } from 'n8n-core';
 
 import config from '@/config';
+import { mockInstance } from '@test/mocking';
 
 import { DeprecationService } from '../deprecation.service';
 
 describe('DeprecationService', () => {
 	const logger = mock<Logger>();
-	const deprecationService = new DeprecationService(logger);
+	const globalConfig = mockInstance(GlobalConfig, { nodes: { exclude: [] } });
+	const deprecationService = new DeprecationService(logger, globalConfig);
 
 	beforeEach(() => {
 		// Ignore environment variables coming in from the environment when running
@@ -109,6 +112,20 @@ describe('DeprecationService', () => {
 		])('should handle value: %s', (value, mustWarn) => {
 			toTest(envVar, value, mustWarn);
 		});
+
+		test('should not warn when Code node is excluded', () => {
+			process.env[envVar] = 'false';
+
+			const globalConfig = mockInstance(GlobalConfig, {
+				nodes: {
+					exclude: ['n8n-nodes-base.code'],
+				},
+			});
+
+			new DeprecationService(logger, globalConfig).warn();
+
+			expect(logger.warn).not.toHaveBeenCalled();
+		});
 	});
 
 	describe('OFFLOAD_MANUAL_EXECUTIONS_TO_WORKERS', () => {
@@ -127,7 +144,7 @@ describe('DeprecationService', () => {
 			test('should warn when OFFLOAD_MANUAL_EXECUTIONS_TO_WORKERS is false', () => {
 				process.env[envVar] = 'false';
 
-				const service = new DeprecationService(logger);
+				const service = new DeprecationService(logger, globalConfig);
 				service.warn();
 
 				expect(logger.warn).toHaveBeenCalledTimes(1);
@@ -138,7 +155,7 @@ describe('DeprecationService', () => {
 			test('should warn when OFFLOAD_MANUAL_EXECUTIONS_TO_WORKERS is empty', () => {
 				process.env[envVar] = '';
 
-				const service = new DeprecationService(logger);
+				const service = new DeprecationService(logger, globalConfig);
 				service.warn();
 
 				expect(logger.warn).toHaveBeenCalledTimes(1);
@@ -149,7 +166,7 @@ describe('DeprecationService', () => {
 			test('should not warn when OFFLOAD_MANUAL_EXECUTIONS_TO_WORKERS is true', () => {
 				process.env[envVar] = 'true';
 
-				const service = new DeprecationService(logger);
+				const service = new DeprecationService(logger, globalConfig);
 				service.warn();
 
 				expect(logger.warn).not.toHaveBeenCalled();
@@ -158,7 +175,7 @@ describe('DeprecationService', () => {
 			test('should warn when OFFLOAD_MANUAL_EXECUTIONS_TO_WORKERS is undefined', () => {
 				delete process.env[envVar];
 
-				const service = new DeprecationService(logger);
+				const service = new DeprecationService(logger, globalConfig);
 				service.warn();
 
 				expect(logger.warn).toHaveBeenCalledTimes(1);
@@ -175,7 +192,7 @@ describe('DeprecationService', () => {
 				});
 				process.env[envVar] = 'false';
 
-				const service = new DeprecationService(logger);
+				const service = new DeprecationService(logger, globalConfig);
 				service.warn();
 
 				expect(logger.warn).not.toHaveBeenCalled();
diff --git a/packages/cli/src/deprecation/deprecation.service.ts b/packages/cli/src/deprecation/deprecation.service.ts
index a71c9e9985..de2b5fe629 100644
--- a/packages/cli/src/deprecation/deprecation.service.ts
+++ b/packages/cli/src/deprecation/deprecation.service.ts
@@ -1,3 +1,4 @@
+import { GlobalConfig } from '@n8n/config';
 import { Service } from '@n8n/di';
 import { Logger } from 'n8n-core';
 
@@ -20,6 +21,9 @@ type Deprecation = {
 
 	/** Whether a config value is required to trigger a deprecation warning. */
 	matchConfig?: boolean;
+
+	/** Function to run to check whether to disable this deprecation warning. */
+	disableIf?: () => boolean;
 };
 
 const SAFE_TO_REMOVE = 'Remove this environment variable; it is no longer needed.';
@@ -52,6 +56,7 @@ export class DeprecationService {
 				'Running n8n without task runners is deprecated. Task runners will be turned on by default in a future version. Please set `N8N_RUNNERS_ENABLED=true` to enable task runners now and avoid potential issues in the future. Learn more: https://docs.n8n.io/hosting/configuration/task-runners/',
 			checkValue: (value?: string) => value?.toLowerCase() !== 'true' && value !== '1',
 			warnIfMissing: true,
+			disableIf: () => this.globalConfig.nodes.exclude.includes('n8n-nodes-base.code'),
 		},
 		{
 			envVar: 'OFFLOAD_MANUAL_EXECUTIONS_TO_WORKERS',
@@ -76,10 +81,18 @@ export class DeprecationService {
 	/** Runtime state of deprecation-related env vars. */
 	private readonly state: Map<Deprecation, { mustWarn: boolean }> = new Map();
 
-	constructor(private readonly logger: Logger) {}
+	constructor(
+		private readonly logger: Logger,
+		private readonly globalConfig: GlobalConfig,
+	) {}
 
 	warn() {
 		this.deprecations.forEach((d) => {
+			if (d.disableIf?.()) {
+				this.state.set(d, { mustWarn: false });
+				return;
+			}
+
 			const envValue = process.env[d.envVar];
 
 			const matchConfig = d.matchConfig === true || d.matchConfig === undefined;